moscot.problems.space.MappingProblem.impute

MappingProblem.impute(var_names=None, device=None)

Impute the expression of specific genes.

Parameters:

• var_names (Optional[Sequence[str]]) – Genes in var_names to impute. If None, use all genes in adata_sc.

• device (Union[Literal['cpu', 'gpu', 'tpu'], str, None]) – Device where to transfer the solutions, see to().

• self (SpatialMappingMixinProtocol[K, B])

Return type:

AnnData

Returns:

: Annotated data object with the imputed gene expression.